REBEAN

Read Embedding Based Enzyme ANnotation

REBEAN is a DNA language Model for enzymatic annotation of sequencing reads. REBEAN is built for discovery of enzymatic function in both known and unknown sequence space mitigating drawbacks of alignment and translation-based approaches. Read more.

Uploads

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  • up to files at the same time and per file
  • compressed upload possible
  • fasta/fastq format required
Note: Registered users can resume uploads within 3 hours.

Urls

  • if url does not directly reference a file, add filename manually using the format: <url>,<filename>
  • compressed archives or fasta/fastq format required
  • one SRA accession id per line
  • format: SRRxxxxxx, ERRxxxxxx, DRRxxxxxx
  • Quality control enabled per default (strongly recommended)
Note: Remote files have to be accessible without authentication.

Submission

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Reference database for mi-faser
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